bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0268_orf1
Length=164
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5807.cgd2_3000                                                       188    5e-47


> 5807.cgd2_3000
Length=144

 Score =  188 bits (478),  Expect = 5e-47, Method: Compositional matrix adjust.
 Identities = 88/126 (69%), Positives = 107/126 (84%), Gaps = 0/126 (0%)

Query  39   RRVQTFGRKKTAIAVALCTEGKGIIRINGSPIHLLKPEALRVKACESILVLGKERFEGID  98
            R VQTFGRKK A+AVALC EGKG++  NG P+ L++PE L+VKA E IL+LGK+ F G+D
Sbjct  6    RMVQTFGRKKNAVAVALCREGKGLVHFNGKPLDLIQPEQLKVKAFEPILLLGKQIFSGVD  65

Query  99   IRVRVRGGGFVSQVYAIRQAIAKGVVAYHQKYVDEAAKKEIRDALVACDRSLVVADPRRC  158
            IR+RV GGG+ SQV+AIRQA+AK +VAY QK+VDEA K+EIRD LV+ DRSLV+ADPRRC
Sbjct  66   IRIRVSGGGYTSQVFAIRQALAKAIVAYTQKFVDEATKQEIRDILVSYDRSLVIADPRRC  125

Query  159  EPKKFG  164
            EPKKFG
Sbjct  126  EPKKFG  131



Lambda     K      H
   0.324    0.141    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 28631644438


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40