bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0288_orf1
Length=282
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  3702.AT5G40200.1                                                     238    1e-61


> 3702.AT5G40200.1
Length=592

 Score =  238 bits (607),  Expect = 1e-61, Method: Compositional matrix adjust.
 Identities = 116/281 (41%), Positives = 183/281 (65%), Gaps = 0/281 (0%)

Query  2    ENIGYIIPSEVVVHFLEDFRRHKKYTGFGDCGFTWQKLENRYMRSALQLKTKQQGVLVKK  61
            ENIGY+IP+ V+VHF++D+ +H KYTGF   G  WQK+EN  +R ++ +++ Q+GV +++
Sbjct  303  ENIGYVIPTPVIVHFIQDYEKHDKYTGFPVLGIEWQKMENPDLRKSMGMESHQKGVRIRR  362

Query  62   VDGASFARDVLQRGDIILTVNGSKVASDGSVAFRNGERILFSWLFAQLFVGDRCCLTILR  121
            ++  +    VL+  DIIL+ +G  +A+DG+V FR+GERI FS+L +Q + GD   + +LR
Sbjct  363  IEPTAPESQVLKPSDIILSFDGVNIANDGTVPFRHGERIGFSYLISQKYTGDSALVKVLR  422

Query  122  RGRQLQVSYQVGKVNLLVPATNDLPRPEYLIVGGLVFVPLSEPFLKSEYGDEFESRAPVR  181
                L+ + ++     L+PA      P Y IV G VF  +S P+L+SEYG E+E  APV+
Sbjct  423  NKEILEFNIKLAIHKRLIPAHISGKPPSYFIVAGFVFTTVSVPYLRSEYGKEYEFDAPVK  482

Query  182  LLDQWQHGMQQFPGQQCVVLTHVLAHEITVGFEHLHSLQLTAFNGHKIKTLRHLKQLVDN  241
            LL++  H M Q   +Q VV++ VL  +I +G+E + + Q+ AFNG  +K L+ L  +V+N
Sbjct  483  LLEKHLHAMAQSVDEQLVVVSQVLVSDINIGYEEIVNTQVVAFNGKPVKNLKGLAGMVEN  542

Query  242  SSDEYWRFDLDHEEVVILRATAARSALKSILNRNLIPSHMS  282
              DEY +F+LD++++V+L    A+ A   IL  + IPS MS
Sbjct  543  CEDEYMKFNLDYDQIVVLDTKTAKEATLDILTTHCIPSAMS  583



Lambda     K      H
   0.324    0.139    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 93999491820


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40