bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0292_orf4 Length=139 Score E Sequences producing significant alignments: (Bits) Value 8364.ENSXETP00000043038 88.6 5e-17 > 8364.ENSXETP00000043038 Length=205 Score = 88.6 bits (218), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 0/139 (0%) Query 1 VLDGCVLAGSVLDGCVLDGCVLDGSVLDGCVLDGCVLDGCVLDGCVLDGCVLDGCVLDGC 60 V + CV V + CV + V + V + + CV + V + CV + CV + V + C Sbjct 20 VRESCVRESYVRESCVRESYVRESCVRESYARESCVRESYVRESCVRESCVRESYVRESC 79 Query 61 VLDGCVLDGCVLDGSVLAGSVLDGSVLAGSVLDGSVLAGSVLDGCVLDGSVLDGSVLAGS 120 V + CV + CV + V V + V + V V + CV + V + V Sbjct 80 VRESCVRESCVRESYVRESCVRESYARESCVRESYVRESCVRESCVRESYVRESCVRESY 139 Query 121 VLDGSVLAGSVLDGCVLDG 139 V + V V + CV + Sbjct 140 VRESCVRESYVRESCVRES 158 Lambda K H 0.324 0.150 0.474 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23001752095 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40