bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0324_orf3
Length=265
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd3_4100 424 1e-117
> 5807.cgd3_4100
Length=260
Score = 424 bits (1090), Expect = 1e-117, Method: Compositional matrix adjust.
Identities = 201/260 (77%), Positives = 232/260 (89%), Gaps = 0/260 (0%)
Query 6 MPQNEYMEQHRKRFGERLDTAERKRKKAARMPHERSKTARKLRGIKAKLFNRRRFVEKAQ 65
MPQNEY+E HRKR G R D E+KRK +R H+ S+ A+KLRGIKAKL+N++R+ EKA
Sbjct 1 MPQNEYIELHRKRHGYRFDHFEKKRKFESRKVHKDSQHAQKLRGIKAKLYNKKRYAEKAT 60
Query 66 MKKTIKQHEEKEGKQKEPETVPEGAVPSYLLDREGVSRTKILTNMIKQKRKEKAGKWQVP 125
++K +K +EEK+ +K+PE V +GAVPSYLLDREGV+RTKIL+NMIKQKRKEK+ KWQVP
Sbjct 61 LRKLVKANEEKDAVEKDPENVQKGAVPSYLLDREGVNRTKILSNMIKQKRKEKSAKWQVP 120
Query 126 IPKVKAMTEEEMFKVLRSGKRKKKMWKRVVNKVCFVGDDFTRKPPKFERYIRPTSLRFKK 185
IPK+KA+ E+EMFK+LR+GKR+KK WKRVVNKVCFVG+DFTRKPPK ERYIRPT LRFKK
Sbjct 121 IPKIKALNEDEMFKILRTGKRQKKSWKRVVNKVCFVGNDFTRKPPKLERYIRPTGLRFKK 180
Query 186 AHVTHPELKATFQLDIVKVKKNPQSQLYTSLGVITKGTIIEVNVSELGLVTQTGKVVWAK 245
AHVTHPELK TF LDIV +KKNPQSQLYT+LGVITKGTIIEVNVSELGLVTQTGKVVWAK
Sbjct 181 AHVTHPELKTTFYLDIVSIKKNPQSQLYTTLGVITKGTIIEVNVSELGLVTQTGKVVWAK 240
Query 246 YAQVTNNPELDGCINAVLLV 265
YAQVTNNPE+DGCINAVLLV
Sbjct 241 YAQVTNNPEIDGCINAVLLV 260
Lambda K H
0.317 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 83755957455
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40