bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0329_orf2
Length=211
Score E
Sequences producing significant alignments: (Bits) Value
5691.Tb09.211.3330 162 6e-39
> 5691.Tb09.211.3330
Length=445
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 119/210 (56%), Gaps = 41/210 (19%)
Query 2 AACFSSGMAATITVLTAYLSAGDHCIMPICLYGGTFRAANEYVSRFGVEFDFVDFRDPSQ 61
A +S+GMAAT TV++A ++AGDH I+ C YGGT RA + +RFG+EF FVD RD S
Sbjct 127 ATVYSTGMAATTTVVSALMNAGDHAIVTDCSYGGTNRACRVFFTRFGMEFTFVDMRDLSN 186
Query 62 VEKAFKDNTKMVLAETPANPTLHLTDLEAIDMIIAKKELERLRNKQKTENATPSTDAAPV 121
VEKA K NTK+V++ETPANPTL LTD+ A+ I
Sbjct 187 VEKAIKSNTKLVISETPANPTLTLTDIRALSKIC-------------------------- 220
Query 122 SDDELLKTISGGNREKERSILFVVDSTFATPHVLHPFEYGADIILHSTTKYFDGHNITTG 181
K + +L V D+TFAT ++ P + GAD+ L STTK+ DGHN+T G
Sbjct 221 ---------------KAKGLLHVCDNTFATAFIMRPIDLGADVSLISTTKFVDGHNMTVG 265
Query 182 GAAISRFLKYHDKIAYTRNICGSIMDPQTA 211
GA +++ +K+ T+NI G+ M P A
Sbjct 266 GALVTKRKDLDEKLRLTQNILGNAMSPFVA 295
Lambda K H
0.319 0.134 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 53680939224
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40