bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0334_orf1
Length=148
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFL2425w 168 3e-41
> 5833.PFL2425w
Length=153
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 75/138 (54%), Positives = 106/138 (76%), Gaps = 4/138 (2%)
Query 11 MIKSVVVVNTQGKPRIVRFYDGTPQEKHQHVMKSLFAAVSRRPSEGCCCFTENTDLFGPN 70
MIK V+V+N GKPR +RFYD + EK Q + K ++ + R CCCF E+ +LF +
Sbjct 1 MIKGVLVINNNGKPRFLRFYDESNHEKQQLITKRVYELIKNRLDRECCCFIEDEELFSSD 60
Query 71 HRIIYRHFATLFFIFVTDNLESELGLLDLIQVVVQVLDACFENVCELDLVFHYDKINYIL 130
+++YRHFATL+F+F+ D++ESELG+LDLI QVLD+ FENVCELDL+++Y++INYIL
Sbjct 61 IKVVYRHFATLYFVFIIDSMESELGILDLI----QVLDSNFENVCELDLIYNYEQINYIL 116
Query 131 DEIIVGGLVMETGVDNIL 148
DEII+GG+V+ET +D I+
Sbjct 117 DEIIMGGIVLETNIDTII 134
Lambda K H
0.328 0.145 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22943761524
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40