bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0353_orf2 Length=209 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.102 81.6 1e-14 > 5833.MAL13P1.102 Length=749 Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 47/148 (31%), Positives = 90/148 (60%), Gaps = 0/148 (0%) Query 2 EEAEQEYRIAAEQCNVFKATLANRDEKLMQLQAEVVRRDTLLKQSEERVRVLRDDLTGAH 61 E+ E +I +Q + ++ + +D +++ L+ E+VR D L+KQ EER + L+ +L Sbjct 528 EKFTSEIKILEKQSSHLQSMIQEKDSQIVLLKKEIVRNDILIKQYEERNKELQKELRLMC 587 Query 62 SQLQQVLKAMAAKDAYMQELETQLRKNDTERQLAYLTEVSKSRKLALDTRMQQELCRAAL 121 L+ V++A KD +M ELE Q+R+N+ RQ AYL EV+K+RK+ D + ++ L + Sbjct 588 DNLENVIEASNKKDLFMNELEKQIRENEVHRQHAYLKEVAKNRKIHADMKFKEILYDKSS 647 Query 122 NDKREKLAAAKQDLFRSESAMERIRKAI 149 + ++L K++L+ ++ M++ ++A Sbjct 648 KHQSDELHDLKKELYLNQIQMQKAKEAF 675 Lambda K H 0.314 0.124 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 53286973563 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40