bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0357_orf4
Length=374
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd1_580 505 7e-142
> 5807.cgd1_580
Length=752
Score = 505 bits (1301), Expect = 7e-142, Method: Compositional matrix adjust.
Identities = 234/374 (62%), Positives = 301/374 (80%), Gaps = 2/374 (0%)
Query 1 LSLIDLPGITRVPLKGSDQSDDIEALTRQMALRYAADPRTIILAVLPANADMSTSDALQL 60
L+LIDLPGITRVPLKGSDQ D+IE LTR MA+RYA DPRTIILAV+PANADMSTSDALQL
Sbjct 68 LTLIDLPGITRVPLKGSDQCDNIEQLTRDMAIRYARDPRTIILAVIPANADMSTSDALQL 127
Query 61 ARRVDPRGVRTIGVITKVDLMDNGTDACKMLLGEEIPLRLGYTGVKNRSQADIKAGKSVQ 120
+RRVDP+G+RTIGV+TK+DLMD GTDA KML G+E+PLRLGYTGVKNRS AD+KAGKS++
Sbjct 128 SRRVDPKGLRTIGVVTKIDLMDRGTDASKMLHGDEVPLRLGYTGVKNRSSADLKAGKSIK 187
Query 121 SCLEDERQYFKTHPVYGHMGSQYWGIPSLVEKLTRVLFLHIKHVLPEIRKEIQLKARGVQ 180
LEDE +F THPVY ++ + G +LV KLT+VLF HI+ LP+IR+EI + R +
Sbjct 188 DALEDEATFFSTHPVYRNLSPELVGTKNLVSKLTKVLFKHIRTFLPDIRREINARIRTLS 247
Query 181 SRIQELGEGVPSESRDRAQLLWTAITDYVEVIKSAIRGKYDKRLQKYFDQ--DQCLTIGS 238
SR+ E G+ VP ES DR QL+W ITDY E+IK+ IRGKYDKRLQ YFD D ++ G+
Sbjct 248 SRLDEFGQSVPLESSDRTQLMWAMITDYCEMIKNTIRGKYDKRLQTYFDHGSDGGMSSGA 307
Query 239 CIRHEYTSLLDEYCDRNISDDITDSQVETAIRLHEGESLPGFPSPDTFEHLILPYLKKLS 298
IR + LLDEY + +++ ++TD ++ AIR+HEG+S+PGFPSPD FE+LILP+L+K+
Sbjct 308 QIRVIFNELLDEYTENDVTSELTDYDIDAAIRMHEGDSMPGFPSPDMFEYLILPHLRKIQ 367
Query 299 PPVMDCLDRVAQTLESLAQRVAERVFCRFPALAERVLEISQEILIREKEATREILQHDVD 358
PVM+CLD+V LE+++Q+VA +VF RFP L++++L+ SQEIL++EKE T+ IL+ V+
Sbjct 368 APVMECLDKVTSALENVSQKVAHKVFSRFPKLSDQILDRSQEILLQEKENTKTILEQLVE 427
Query 359 AEMGYLFTNDERYL 372
AE GYLFTND +YL
Sbjct 428 AETGYLFTNDSKYL 441
Lambda K H
0.320 0.137 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 144601168804
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40