bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0368_orf2
Length=200
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFF0835w                                                       67.8    2e-10


> 5833.PFF0835w
Length=446

 Score = 67.8 bits (164),  Expect = 2e-10, Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 8/199 (4%)

Query  2    SAEMSKHFANRREIQAEMTREMQKHQAYMQQVKRERGLKMREEQERRNLENERYQLTRDL  61
            S +M+ +F  RR I  EM  + Q+++++     + +  K++E++ER+NLE E+  L + L
Sbjct  222  SKKMNHYFMERRSITVEMEEKKQQYRSFKLNQLQAKQQKIKEDRERKNLELEKQSLEKKL  281

Query  62   ERVESELPYEAECLLLSQTIQYLQKIIEEPAANGVEKEQAEPAVDENLAGALLPKSQRKE  121
            E ++  LPY  E  L+   + YL+K+ EE      +K+Q       N A  +  + +  E
Sbjct  282  EDIDV-LPYREELALIENMLAYLKKLQEEFKLEESKKQQ-------NAAKKINGEVETNE  333

Query  122  VYFYAPKTKGKHGKDHEKKKEKPKTLKYDVGTLAYFEQCGLTAPVLIEDVPACLDKLEAK  181
                       + K  + KK+K KT K D+  L YF   G+  PV  +++ +C+ KL  K
Sbjct  334  NKDDNKTKNENNNKKAKSKKDKQKTFKLDMNILCYFVTAGINPPVSFDEIDSCIQKLHEK  393

Query  182  LQNYKNLQRESAQKVDERK  200
               Y+  + ES + V+ R+
Sbjct  394  KDMYEQKRDESVKNVETRR  412



Lambda     K      H
   0.311    0.128    0.348 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 47774528022


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40