bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0384_orf1
Length=189
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFI0880c                                                        201    9e-51


> 5833.PFI0880c
Length=396

 Score =  201 bits (511),  Expect = 9e-51, Method: Compositional matrix adjust.
 Identities = 101/189 (53%), Positives = 143/189 (75%), Gaps = 0/189 (0%)

Query  1    PKWTLPNWWYHYAVHFAATTGSAFISSGHRDMSVGMVFIDTWVLSSAFPFGNVTEKAWKD  60
            PKW +PN+WYHY  HF  ++G + + +GH+D++   +FIDTWVLSS FP+  + EKAW D
Sbjct  142  PKWIMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWND  201

Query  61   LEKTLEIAPKVFDYIIVVGNRPVYSSGSSKGDSMLQYYLQPLLKKAGVDAYISGYDRDME  120
            L+  L +A K+ D+IIVVG++P+YSSG S+G S L YYL PLLK A VD YISG+D +ME
Sbjct  202  LKSQLSVAKKIADFIIVVGDQPIYSSGYSRGSSYLAYYLLPLLKDAEVDLYISGHDNNME  261

Query  121  VIEEDDIAYINCGTGSLSGGSALVKSSGSKFFSGDRGFCLFEMTADGLITKFISGENGET  180
            VIE++D+A+I CG+GS+S G + +K+S S FFS D GFC+ E++ +G++TKF+S + GE 
Sbjct  262  VIEDNDMAHITCGSGSMSQGKSGMKNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKKGEV  321

Query  181  LYEHKQPVK  189
            +Y HK  +K
Sbjct  322  IYTHKLNIK  330



Lambda     K      H
   0.318    0.136    0.420 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 41818451300


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40