bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0392_orf1 Length=219 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.130 227 2e-58 > 5833.MAL13P1.130 Length=303 Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 109/205 (53%), Positives = 142/205 (69%), Gaps = 0/205 (0%) Query 12 GKDPLSLLRFLRCNPESVGKSPLWAAQLATGLFILGNLTTMAFQTLTDDDSSIKQSRGYR 71 GK+PL +L FLR P SVG +P+ + G F++G L M+F LT+DDSSIKQSRGYR Sbjct 54 GKNPLGMLNFLRALPGSVGTAPMPLVLFSIGGFLMGTLLIMSFLQLTEDDSSIKQSRGYR 113 Query 72 AGTKFLQQASSFGVFASTLALLVFYSANYYFDDPWMSKNFGGGSSWLIFFTSRVCDAFAL 131 AGTKFL QA+S G + +L+L+ +++YYFDDPWM + G GSSW+++F+SR+ DAF L Sbjct 114 AGTKFLLQATSMGTVSWSLSLICLMASSYYFDDPWMEEKIGAGSSWILYFSSRLIDAFCL 173 Query 132 FFYAGSMFFLETYHSEGAGEAWGWLGAICFKLAAFAEIAALAAWGTSSFEVLDAVYTVML 191 F Y FFLE YHSEGAGEAWGWL +CF +F E+ AL + T F LD Y + L Sbjct 174 FLYGSGCFFLEVYHSEGAGEAWGWLCGMCFIATSFVEVLALTLFNTPLFSSLDWFYCLFL 233 Query 192 GVSISVAFLWSLFFEPASHRFDVFL 216 G+S+ + +W L FEP SHR+DV L Sbjct 234 GLSLFFSVIWGLLFEPISHRYDVKL 258 Lambda K H 0.326 0.137 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 58561024608 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40