bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0425_orf1
Length=129
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PFE0430w                                                        139    2e-32


> 5833.PFE0430w
Length=1490

 Score =  139 bits (350),  Expect = 2e-32, Method: Composition-based stats.
 Identities = 65/108 (60%), Positives = 83/108 (76%), Gaps = 0/108 (0%)

Query  22   LKKELPLVDHASCKFPPIKKNLYVQVKELTDLKDHEVEAIRKTNGNIKVRGKQCPRPVSS  81
            + K+L  V+H    + PIKKN+YVQVKE+T++KD +V+  RK NGNI VRGK CPRPV  
Sbjct  665  MNKKLLEVNHDEIDYIPIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQY  724

Query  82   FHQCGLPEKILRHLEARGFEKPFPVQSQCIPILMCGRDLIAVAETGSG  129
            F+QCGLP KIL+ LE + F+K + +Q Q IP LMCGRD+IA+AETGSG
Sbjct  725  FYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSG  772



Lambda     K      H
   0.320    0.138    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22342951125


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40