bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0464_orf1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF11_0114 325 1e-87
> 5833.PF11_0114
Length=392
Score = 325 bits (833), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 155/286 (54%), Positives = 201/286 (70%), Gaps = 10/286 (3%)
Query 12 METPTVIIDNGSGFIKAGTNTDSSPSVFFPTVVGFPRRRFLHLFNDKPSQEKIFIGDKAV 71
ME T++IDNGSG+IKAG N+ P++ FPT+VG + ND+ ++I+ GD+A
Sbjct 1 MENKTIVIDNGSGYIKAGINSSEEPTIVFPTIVGIEK-------NDET--KRIYTGDEAF 51
Query 72 ENRHQLTIVNPIDHGHIDDWEQMAYVWQHVYDVLGLNPSEHPCLLTEPPNCSSTHRNKLA 131
+ L I PIDHGHI DW++ VW + + + + S LLTEPP CS +HR K+
Sbjct 52 FHESNLNIYRPIDHGHISDWDKAQKVWDYTLNCVDPSKSIKDILLTEPPLCSISHRKKMG 111
Query 132 ETLFEGFDAPEVCLGVTGLMAIYGTGQTTGLVVDIGEGVTQCVPVFDGYLEASSLRRSDF 191
E FE FD + L V+GLM++Y +G TTGLV+DIGEGVTQC+PVFDGY+E +S+ RSDF
Sbjct 112 EIFFEYFDTLNLNLSVSGLMSLYASGLTTGLVLDIGEGVTQCLPVFDGYIEKNSIIRSDF 171
Query 192 GGEELQMYLQKILCDMGYQMTTRDDYEHVRVIKETLCFCSLDPASDQQRTDLDRTYHLPD 251
GGEEL M+LQK++CD+GY MTT E+V+ IKET+CFCSL+P+ DQ R DL TY LPD
Sbjct 172 GGEELSMFLQKLICDIGYSMTTTKSLEYVKNIKETICFCSLNPSEDQLRNDLAATYTLPD 231
Query 252 GLTLRDGETTEITLGPERFYPAEALFNPQLCGRDNPSLTDLIWSSV 297
G LRDG + I + ERFY AEALFNPQLC RDN S+ D+IW S+
Sbjct 232 GDVLRDGYDS-IEIAHERFYVAEALFNPQLCHRDNLSIIDIIWKSI 276
Lambda K H
0.320 0.139 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 103213341868
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40