bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0508_orf1 Length=181 Score E Sequences producing significant alignments: (Bits) Value 235909.GK1027 198 5e-50 > 235909.GK1027 Length=288 Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 91/180 (50%), Positives = 125/180 (69%), Gaps = 0/180 (0%) Query 1 AEEVYVHLKEKGVAAVDAPVTGGDVGARNGTLTVMAGGDAKTFENLRPLFEAVGTNIIHA 60 A+ +Y K+KG+ A+DAPV+GGD+GAR GTLT+M GGD F +P+ E +GTNI+ Sbjct 102 AQSIYEAAKQKGIHALDAPVSGGDIGAREGTLTIMVGGDEDVFLACKPILERLGTNIVRQ 161 Query 61 GPAGSGQRMKLCNQITLCTNLVGLAEGLLFAERAGLDIEKTLAVLSGGGAASWSVSTYGP 120 G AG+GQ K+CNQI + TN++G+ E + +A+RAGLD K L ++ G A SWS+S P Sbjct 162 GGAGAGQHTKMCNQIAIATNMIGVCEAMAYAKRAGLDPFKVLESIAKGAAGSWSLSNLAP 221 Query 121 RIRDGDFRPGFFVRHLVKDLRLALNEAARLKLALPGLGLALQLYQALEAQGGGSLGVHAL 180 R+ GDF PGF+V+H +KD+++AL EA R+ L LPGL LA QLY+ L G + G AL Sbjct 222 RMLSGDFAPGFYVKHFIKDMKIALEEAERMNLPLPGLALAKQLYEELAQAGEENSGTQAL 281 Lambda K H 0.319 0.138 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 37665090561 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40