bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0526_orf5
Length=509
Score E
Sequences producing significant alignments: (Bits) Value
106370.Francci3_3077 62.4 4e-08
> 106370.Francci3_3077
Length=708
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query 351 GFSHNDLKLQNLFVREDGTFFIGDFGAGTLVGQPLDRLTGVTIQYAEKELAVAAEEDTPG 410
G H D+K +N+ + +DG + DFG V QP LTG + L A E+ T G
Sbjct 140 GIIHRDIKPENILLGDDGQVKVADFGLARPVSQPTQALTGGVVMGTVGYL--APEQVTHG 197
Query 411 DPRPVADERSDLWSLGLCLYSIFTDGKLPYGLDTTDSPGATLKELAERKVNSKTLRRDLM 470
VAD RSD+++ G+ L+ T G+LP+ GAT +A + V+ M
Sbjct 198 ----VADTRSDVYAAGVVLFESLT-GQLPHS-------GATPMSVAYQSVHGDVPAPSTM 245
Query 471 KEGVPLRWQDLIIDLLKVERSER-MDACTLVA 501
EG+P L++ + + R +D L+A
Sbjct 246 IEGIPAELDGLVLRATARDPARRPVDGAALLA 277
Lambda K H
0.317 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 220026895288
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40