bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0545_orf2
Length=159
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  10116.ENSRNOP00000051895                                             117    2e-25


> 10116.ENSRNOP00000051895
Length=341

 Score =  117 bits (292),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 4/158 (2%)

Query  1    PSSTQPSSTQPSSTQPSSTEPSSTQPSSTQPSSTEPASTQPSSTQPSSTQPSSTEPASTE  60
            P   QP + QP   Q  + +P   QP + QP   +P + QP   QP + QP   +P + +
Sbjct  4    PGMAQPGAVQPGMAQLHAVQPGIAQPGAIQPGMAQPGAVQPGMAQPGAIQPGMAQPGAVQ  63

Query  61   PSSTEP---SSTEPSSTEPSSTEPSSTQPSSTEPSSTEPSSTEPSSTEPSSTEPSSTEPA  117
            P   +P      +P + +P   + S+ QP   +  + +P   +P + +P   +P   +P 
Sbjct  64   PGMAQPVQSGIAQPGTVQPGMAQASAVQPGMAQAGAVQPGMAQPGAVQPGMAQPGVVQPG  123

Query  118  STEPSSTEPASTEPSSTEPASTQPSSTQPSSS-LPASR  154
              +P + +P   +P + +P   QP + QP  + L A R
Sbjct  124  MAQPGAVQPGMAQPGAVQPGMAQPGAVQPGMAQLRAVR  161



Lambda     K      H
   0.275   0.0931    0.234 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 26246233818


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40