bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0585_orf2
Length=302
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  383372.Rcas_0920                                                     281    2e-74


> 383372.Rcas_0920
Length=871

 Score =  281 bits (718),  Expect = 2e-74, Method: Compositional matrix adjust.
 Identities = 143/271 (52%), Positives = 192/271 (70%), Gaps = 10/271 (3%)

Query  8    EFKGRQRGMFPVSFQDMVADRQGATDVTISQYGVDLSFMAQQGLLPPVVGRDEEIDRIAQ  67
            E +G QR   P             T   + QYG DL+ +A++G L PV+GRDEEI R+ Q
Sbjct  145  EVRGSQRVTSPTP---------EGTYAALEQYGRDLTELARRGKLDPVIGRDEEIRRVIQ  195

Query  68   ILSRKMTKAPILLGEPGVGKTAVIEGLAQRIVEGAVPESLRKRRIFALDLLSLSAGSAMR  127
            ILSR+    P+L+GEPGVGKTA++EGLAQRIV   VPE+L+ +RI ALD+ +L AG+  R
Sbjct  196  ILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVREDVPEALKNKRIIALDMGALIAGAKYR  255

Query  128  GEFEKRMKEIIQYLQANVDEVILFIDEIHTLIGAGKAAGSMDASQILKVPLARGEIVLVG  187
            GEFE+R+K +++ +Q   D+VILF+DE+HT++GAG A G+MDAS +LK  LARGE+ +VG
Sbjct  256  GEFEERLKAVLKEIQER-DDVILFVDELHTVVGAGAAEGAMDASNMLKPMLARGELHMVG  314

Query  188  ATTLSEYKLYIEKDAAFCRRFQKIVVEAPSKERTLSILTKVKGNYERHHNMRISDEVLAA  247
            ATTL EY+ +IEKDAA  RRFQ ++V+ PS E T+SIL  +K  YE HH +RI+D  + A
Sbjct  315  ATTLDEYRKHIEKDAALERRFQPVMVDPPSVEDTISILRGLKERYETHHGVRITDAAIVA  374

Query  248  VVGLSDQYIKRRSFPDKALDLLDESCAMRRV  278
               LSD+YI  R  PDKA+DL+DE+ A  R+
Sbjct  375  AATLSDRYISDRFLPDKAIDLIDEAAARLRM  405



Lambda     K      H
   0.321    0.137    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 105013574575


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40