bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0595_orf1
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd5_4170 176 4e-43
> 5807.cgd5_4170
Length=445
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 122/178 (68%), Gaps = 0/178 (0%)
Query 1 TVLVYLRKQNKLFTAHVGNSRAVLCKMNRYGCGVRAVDLTVDHTPTNNKELRRIVKAGGQ 60
TV+++L +N++ AHVG+SR+VL + +R G + AVDLT DH P + E RRI+ AGGQ
Sbjct 266 TVILHLPLENRIIAAHVGDSRSVLARWSRSGRVLEAVDLTNDHKPNSESEKRRIIAAGGQ 325
Query 61 VRALGGDGLHRIFLTSGCLPGLAVARSIGDTLAGGAGVISLPEIREYKIDAKRDKFLLLC 120
V+ + GD +R+F+ PGLA++R+IGDTL AG+I P+I ++I ++D F+L+C
Sbjct 326 VKRIEGDIPYRVFIKGKMYPGLAMSRAIGDTLGYQAGIIPEPDINTFQIQPEKDAFILIC 385
Query 121 TDGVWNVLSSQEAVEIANSAEQQEWRTAPEELARESWRRWINEEQIFADDMTVLFLKL 178
+DGVW +SSQEAV+I + + + E+LARE+WRRWI EE DD+TV + L
Sbjct 386 SDGVWEFISSQEAVDIVAEGGSSDAQLSAEKLAREAWRRWIQEEGNVVDDITVQVIYL 443
Lambda K H
0.321 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 36430169559
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40