bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0633_orf1
Length=111
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF08_0054 197 6e-50
> 5833.PF08_0054
Length=677
Score = 197 bits (502), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/111 (86%), Positives = 102/111 (91%), Gaps = 0/111 (0%)
Query 1 PEEISAMVLMKMKEIAEQFIGKEIKEAVITVPAYFNDSQRQATKDAGTIVGLNVLRIINE 60
PEEIS+MVL KMKE AE F+GK IK AVITVPAYFNDSQRQATKDAGTI GLNV+RIINE
Sbjct 128 PEEISSMVLQKMKENAEAFLGKSIKNAVITVPAYFNDSQRQATKDAGTIAGLNVMRIINE 187
Query 61 PTAAAIAYGLDKKGQGEMNVLIFDMGGGTFDVSLLTIEDGILEVKATAGDT 111
PTAAAIAYGL KKG+GE N+LIFD+GGGTFDVSLLTIEDGI EVKATAGDT
Sbjct 188 PTAAAIAYGLHKKGKGEKNILIFDLGGGTFDVSLLTIEDGIFEVKATAGDT 238
Lambda K H
0.316 0.135 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23016794144
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40