bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0640_orf2
Length=296
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF13_0124                                                       139    2e-31


> 5833.PF13_0124
Length=259

 Score =  139 bits (349),  Expect = 2e-31, Method: Compositional matrix adjust.
 Identities = 85/234 (36%), Positives = 123/234 (52%), Gaps = 40/234 (17%)

Query  98   GSMKAPPRSQEPNGLLQSGLSAVKDGA-------------SRVLDGASSVVNATRAT---  141
            GSM    R++E  GL+Q  +   K GA             + + DGAS V N+T A    
Sbjct  25   GSMDNN-RNEEEKGLIQKAIDLSKKGAETLQKGLKETLGKNNMNDGASMVSNSTTAESGS  83

Query  142  -IADNPL----------------------SSQNMLMFGVVAAVGVLFMFLAFLTLPLLVF  178
              ++ PL                      S +N  +F ++  + VLFM L+F TLP++V 
Sbjct  84   MFSNFPLFNNNNQNRENETSSFFAFTTLVSYKNFPLFCILFGISVLFMILSFFTLPMIVI  143

Query  179  APSKFALLFTMGSLCFLSALALLRGVVALFRHLVEPTRLPFTAVYFSSLFLTLYATLVAK  238
             P +F   FT+ S+CF+S+LA L+G   L+ HL+E  RLPFT  Y  SL  TLY TL+  
Sbjct  144  TPRQFGFFFTVSSICFVSSLAFLKGFSNLYHHLMEKQRLPFTTAYILSLLSTLYFTLINP  203

Query  239  SYVLTLVFSVLQLCGLASFLVSYIPGGSHMLKFMGQAAWQVLRKAFKCGGSRDL  292
             Y+L L+ SV+Q+  L SFLVSYIPGG+  +K +  A +  ++  F+   + DL
Sbjct  204  LYLLALITSVIQMLALISFLVSYIPGGAGAIKMLINAIYSYVKNLFRRSNTSDL  257



Lambda     K      H
   0.322    0.137    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 101413109161


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40