bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0696_orf2
Length=205
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF07_0078 164 2e-39
> 5833.PF07_0078
Length=462
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 120/194 (61%), Gaps = 5/194 (2%)
Query 7 ECKVNYTDMDGD-VSLKIDASTCTDTSITEITGDVLLYYELSNYFQNHRHFMKSRSDKQL 65
ECK++Y + + + L+I+ + C + ++YEL N++QNH+ ++ S+S QL
Sbjct 196 ECKISYGEYNTSPLVLEINENNCKGPK-RPFKKNAYIFYELHNFYQNHKKYLVSKSHNQL 254
Query 66 EGKVYTAASEVRTACDPRVESSDGRVLHPCGLSAGSVFTDVFSAVEEDEITE-IELDESR 124
G VYT +EV + C P ++ +G++LHPCGL A S+F D FS + E+ I+LDES+
Sbjct 255 MGTVYTKDNEV-SQCGPITKNHEGKILHPCGLIARSIFNDTFSVYMDRELHNMIKLDESK 313
Query 125 EAICWDWDLSTFKNPSSEEINAAAPQVDFWLFNQTYASALLMDKPGVGWGVENSHFIVWV 184
E I W D + FKNPS E+ VDFWL N+ Y +AL M+ G+GVENSHFIVW+
Sbjct 314 EGITWYSDYNKFKNPSDSEMELHKSHVDFWLMNEKYKNALNMNNEN-GYGVENSHFIVWM 372
Query 185 RESPLPVFRKVYGR 198
+ + L FRK Y +
Sbjct 373 KTAALSEFRKKYAK 386
Lambda K H
0.317 0.132 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 50836997767
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40