bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0713_orf1 Length=162 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd4_240 233 2e-60 > 5807.cgd4_240 Length=433 Score = 233 bits (593), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 100/146 (68%), Positives = 127/146 (86%), Gaps = 0/146 (0%) Query 15 SSKNFPLILIKLYTYQMCRSLGYLHALGICHRDVKPQNLLVDYRTHVLKLCDFGSAKRLV 74 S ++ P+ LI +Y YQ+ R++G++H+LGICHRD+KPQNLLV+ + + LKLCDFGSAK+L+ Sbjct 184 SGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLI 243 Query 75 PGEQSVAYICSRFYRAPELMLGANEYTTAIDIWSLGCVLGELLLGRPLFAGETSVDQLVK 134 P E SVAYICSRFYRAPELMLGA EYT +ID+WS+GCV GEL+LG+PLF+GETS+DQLV+ Sbjct 244 PSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVR 303 Query 135 IIQILGTPTRYQMSAMNPNYIEFRFP 160 IIQI+GTPT+ QM MNP+Y E RFP Sbjct 304 IIQIMGTPTKEQMIRMNPHYTEVRFP 329 Lambda K H 0.321 0.139 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 27386790332 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40