bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0774_orf4 Length=231 Score E Sequences producing significant alignments: (Bits) Value 7159.AAEL007322-PA 96.7 5e-19 > 7159.AAEL007322-PA Length=361 Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 10/165 (6%) Query 71 LTGTATVRGSFCNNTDIALPKKKGSINLGQLMVLSFVVPSIIIILVELLIALVRATEDKE 130 L G RG FC++ + P ++ L ++ VP ++I+ EL+ A V+ + Sbjct 97 LVGQPYERGFFCDDESLMHPFHDSTVTNWMLYIIGIAVPILVILGTELVRAHVKKSN--- 153 Query 131 AQQSSNVRMFCWEVPQWIVDLYTYLGGFGFTMATAWLFADSLKCFVGSLRPHFFDACKPD 190 + ++++ +P WIV+ Y +G FGF A + L D K +G LRPHFFD C P Sbjct 154 ---ALPLKVYSVTIPYWIVEAYKSIGMFGFGAACSQLLTDVGKYTIGRLRPHFFDVCNPR 210 Query 191 WSQ-VKCKGSNGEYVYVEDFHCMND---AHRVEDARRSFPSGHST 231 CK Y+EDF C ++ A +++ R SFPSGHS+ Sbjct 211 LPDGTTCKDPQNHGRYIEDFICTSEKSSARMLKEMRLSFPSGHSS 255 Lambda K H 0.323 0.136 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 65005431479 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40