bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0791_orf1
Length=154
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFL0185c 104 1e-21
> 5833.PFL0185c
Length=359
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 73/94 (77%), Gaps = 0/94 (0%)
Query 19 IEWYKEKDITKKIIIRKQRNKKTKQIRTITETVNNNSFFNLFNCHDIPSDDKLQQMDEKE 78
I+WY K+I KK +++KQ NK +++++T+ +TVN +SFF+ F H +P+ + ++Q+ + E
Sbjct 200 IDWYDNKNILKKNVVKKQHNKNSREVKTVQQTVNRDSFFHFFTSHKVPNSNVIKQLSKHE 259
Query 79 VEELQMVVEADYDIGITIRDKIIPRAVEWYLGQV 112
V +L+M++E DY++ +TI+++IIP AV++YLG +
Sbjct 260 VAQLEMIIEGDYEVALTIKERIIPYAVDYYLGII 293
Lambda K H
0.312 0.131 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23121682173
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40