bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0891_orf1
Length=185
Score E
Sequences producing significant alignments: (Bits) Value
5833.PFF0760w 79.0 7e-14
> 5833.PFF0760w
Length=156
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query 48 PGRTRGGGYGGPSP-----YGRSGPYSTGGGGGGMNHWSSNSSSSYGGGGGPNSSGVHWS 102
R R Y S Y + Y T +N Y G G S
Sbjct 10 EHRRRKNNYNNKSHGKYYNYNKHDDYKTNNQHNRIN--------KYRGKG---------S 52
Query 103 WSNGPRGGSSTAIVRISGLDYSVLDSELRELMEKSCEGILKVWIDYDKTDRSRGTGGCVF 162
+ + ++ V+IS LDY++ ++L EL C+ ++ WI+YD TDRS GT CVF
Sbjct 53 YGSNYEERNNEIRVKISNLDYTISKNDLMELFSNVCK-VVNAWINYDHTDRSNGTAVCVF 111
Query 163 RTLADAQRAVETFDGRRIEGKPL 185
+ DAQ+A++ +DG IEG +
Sbjct 112 ENINDAQKAIDKYDGSEIEGLSI 134
Lambda K H
0.313 0.140 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 40134932565
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40