bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_0901_orf2
Length=294
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF13_0226                                                       304    2e-81


> 5833.PF13_0226
Length=462

 Score =  304 bits (779),  Expect = 2e-81, Method: Compositional matrix adjust.
 Identities = 140/246 (56%), Positives = 194/246 (78%), Gaps = 4/246 (1%)

Query  1    RLKLTCEQPIVPVPVIQEIHRRDKIIKVPQVDVVDAVKPRVFNQGVEHEVPKMRIDAQPV  60
            +LKL C QPI+PV V+Q I RRDKII +PQV+V D V P+V+NQ ++H+VP + I+    
Sbjct  139  KLKLLCSQPIIPVSVVQGILRRDKIILIPQVEVTDVVIPKVYNQNIKHDVPTLNIEIMKS  198

Query  61   TIEIPKYKYVEREVLVPIVTGYTHKFVPKWEIREVPRPVVKYVGEQETIEVEVPQVKFVD  120
             + IP  KYV++E+++PI+TGYTHKFVPKW+I EVPRPVVKY+GEQ+ +EVEVP++K++D
Sbjct  199  NVNIPNVKYVDKEIIIPIITGYTHKFVPKWDIHEVPRPVVKYIGEQKIVEVEVPEIKYID  258

Query  121  RIVEKEIVVDTIEKKVPKIIEVPKYVDTVKYVWKPVEKVVHVERFVPKFDVSLECPAPLI  180
            + VE+E++VDT+EK+VPKIIEVPKYVD VKYVWKP+EK+V+V++ +PKFDV+LECP PLI
Sbjct  259  KFVEREVIVDTVEKRVPKIIEVPKYVDEVKYVWKPIEKIVYVQKLIPKFDVNLECPPPLI  318

Query  181  VPYPVQKVTEMPAVMVRKTPAEIQETE-VEVVSPEGTVRVPEEYIREYKKTEAQEGGILC  239
            VPYPVQ++ ++  VMV+K   EI +    ++ SPEG++ +PEEYI  Y + +    G+L 
Sbjct  319  VPYPVQRIKQISPVMVKKNNTEIPDYNYYDLNSPEGSLPIPEEYIHHYSRKQKMNKGLLS  378

Query  240  QTMECC  245
                CC
Sbjct  379  T---CC  381



Lambda     K      H
   0.316    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 100212954023


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40