bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0924_orf1 Length=165 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_4080 171 8e-42 > 5807.cgd7_4080 Length=451 Score = 171 bits (433), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 77/165 (46%), Positives = 114/165 (69%), Gaps = 0/165 (0%) Query 1 LATKFEIQAFPTLKLFPVGPKSTSVVKEYEGPRTADEIVKFAMEFYGAKAEAEQLLSEEQ 60 +A +++IQ FPTL +FP G K Y GPRTA+++ +FA++F + A +Q++S+E Sbjct 245 MAHRYKIQGFPTLLMFPAGEKREITPVNYNGPRTANDLFEFAIKFQSSSASIKQMISQEV 304 Query 61 FRSECGETLCILAFLPDILDSQEEGRKNYLQTLNQVVKASITVPVKFLWLQGGDNFDLEE 120 F + C + LC++AFLP I DS + R+ YL+ VV AS + ++FLW +GG FD EE Sbjct 305 FENTCTKGLCVIAFLPHIADSSDSEREKYLKIYKDVVSASAAMTIRFLWSEGGSQFDFEE 364 Query 121 QLHLAFGWPAVVAVHLARGKFSVHRGNFTRESINSFLHQLLAGRA 165 +L+LAFG+PAVVA++ + +FS HRG+FT ES+NSF+ L GRA Sbjct 365 KLNLAFGYPAVVAINNEKQRFSTHRGSFTVESLNSFIIALTTGRA 409 Lambda K H 0.320 0.136 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 29254071491 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40