bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0950_orf2
Length=397
Score E
Sequences producing significant alignments: (Bits) Value
5807.cgd7_720 123 9e-27
> 5807.cgd7_720
Length=364
Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 113/212 (53%), Gaps = 36/212 (16%)
Query 130 CYCKLLVSNHLAGIIIGQAGSEIRTLKSLTGAKIVLSPHGMYFPGTTERVAALEGPESSV 189
+ KLL+S+ A I+ +GS ++ +K + I++S YFPGT RVA LEG E +V
Sbjct 23 IFVKLLISDKAANRILSNSGSILKKIKQVNHVFILVSGTNKYFPGTNYRVATLEGNEKNV 82
Query 190 ---LHVLDWILDKLAAAAGDSKELAAAAAAVQQHQDGLNTLPLQQQLQQQLLLHAGSAPI 246
+ VLD++L ++K+ Q+GL +
Sbjct 83 NETMEVLDFLL-------KNNKD---------DGQEGL-----------------KNYEY 109
Query 247 SLRLCVPRAVVGSLIGRSGGYIQSLRVASGASINISPLFVSAEEACAERIISIESRKTQS 306
++RL VPR+V+GS+IG G +I +R A+ A INISP+FV++E+AC ERII+I +
Sbjct 110 NIRLAVPRSVIGSIIGIKGEFISHVRTATSAHINISPIFVTSEKACNERIITISGSNSNQ 169
Query 307 LRVAAFTLLKKINAHPDKASCRHVCYYRKHNF 338
+ A L KK+N+ P+ SC+ V Y R F
Sbjct 170 VIHAFIILTKKVNSSPEGRSCKSVIYRRADFF 201
Lambda K H
0.314 0.123 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 158231606847
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40