bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0950_orf2 Length=397 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd7_720 123 9e-27 > 5807.cgd7_720 Length=364 Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 74/212 (34%), Positives = 113/212 (53%), Gaps = 36/212 (16%) Query 130 CYCKLLVSNHLAGIIIGQAGSEIRTLKSLTGAKIVLSPHGMYFPGTTERVAALEGPESSV 189 + KLL+S+ A I+ +GS ++ +K + I++S YFPGT RVA LEG E +V Sbjct 23 IFVKLLISDKAANRILSNSGSILKKIKQVNHVFILVSGTNKYFPGTNYRVATLEGNEKNV 82 Query 190 ---LHVLDWILDKLAAAAGDSKELAAAAAAVQQHQDGLNTLPLQQQLQQQLLLHAGSAPI 246 + VLD++L ++K+ Q+GL + Sbjct 83 NETMEVLDFLL-------KNNKD---------DGQEGL-----------------KNYEY 109 Query 247 SLRLCVPRAVVGSLIGRSGGYIQSLRVASGASINISPLFVSAEEACAERIISIESRKTQS 306 ++RL VPR+V+GS+IG G +I +R A+ A INISP+FV++E+AC ERII+I + Sbjct 110 NIRLAVPRSVIGSIIGIKGEFISHVRTATSAHINISPIFVTSEKACNERIITISGSNSNQ 169 Query 307 LRVAAFTLLKKINAHPDKASCRHVCYYRKHNF 338 + A L KK+N+ P+ SC+ V Y R F Sbjct 170 VIHAFIILTKKVNSSPEGRSCKSVIYRRADFF 201 Lambda K H 0.314 0.123 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 158231606847 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40