bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_0960_orf1
Length=405
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF14_0614 94.0 8e-18
> 5833.PF14_0614
Length=1502
Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 100/235 (42%), Gaps = 46/235 (19%)
Query 196 FVKEAGLDIPWYMVNGEAESTISSSAPYRYHYTRQDANFHNPNWLYKSVITMVAN----- 250
F EA IP+Y V GE + S + HY+++ + PN Y N
Sbjct 761 FASEA---IPFYSVLGEKDYFYFPSEQIQEHYSKRIPGYFMPNNYYCVNYDFTYNPVKKN 817
Query 251 ------------LTTATGGTE-----DQEFTVHVISIDTWALFGGTPFYDNLGQYQNNMI 293
GT+ ++F I IDTWAL G P N ++
Sbjct 818 VNGDEDDDDDEEEEEGDSGTDRKVKTQEKFRASFIFIDTWALMVGFPIIRNYRAFREQFN 877
Query 294 ALSNALYHSAKAKADWIIVQGHHPLTSTGPEAEEARLTYIDDMVKSSRPRGPEHRLV-DL 352
LS LY SAK K+DWI V GHHPL S+G ++ S H ++ D
Sbjct 878 WLSKTLYESAK-KSDWIFVVGHHPLISSGRRSDNY-----------SYEEHSFHDIIRDF 925
Query 353 LTSYQVDAYISGHDNVLEYVSMADLDKNSTLAFITSGGGTRIM--SGILGRGWLG 405
L +Y VDAY S HD+++EY+ +D +G +R++ + +GRG+ G
Sbjct 926 LFNYHVDAYFSAHDHLMEYIKFGSVD------LFINGSSSRVLFDNSSMGRGYFG 974
Lambda K H
0.314 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 162972628775
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40