bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_0975_orf1 Length=120 Score E Sequences producing significant alignments: (Bits) Value 7159.AAEL000634-PA 165 4e-40 > 7159.AAEL000634-PA Length=400 Score = 165 bits (417), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 79/120 (65%), Positives = 91/120 (75%), Gaps = 0/120 (0%) Query 1 VSDAGILTEENTLLVLVDDMKDGVALVHQMPFVCNREGFTAILEKVYFGTAHAWIYLAAD 60 +SDAGI + +TL +V+ M D V LVHQMPFVC+REGF A EK+YFGT + IYL AD Sbjct 145 ISDAGIRMKSDTLTDMVNHMTDRVGLVHQMPFVCDREGFAAAFEKIYFGTVQSRIYLCAD 204 Query 61 FLRINCLTGMSALMRKDVLDEVGGISAFGQYLAEDFFFAKSFTDRGWKIKLSSIPALQNS 120 L INC TGMS LMRKDVLDE+GGI +FG YLAEDFF AK F D GWK+ +SS PA QNS Sbjct 205 LLGINCHTGMSCLMRKDVLDELGGIQSFGCYLAEDFFLAKGFHDAGWKLTISSQPAWQNS 264 Lambda K H 0.325 0.139 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23080484097 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40