bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_1006_orf3
Length=255
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  3702.AT5G03340.1                                                     447    1e-124


> 3702.AT5G03340.1
Length=810

 Score =  447 bits (1150),  Expect = 1e-124, Method: Compositional matrix adjust.
 Identities = 209/255 (81%), Positives = 237/255 (92%), Gaps = 0/255 (0%)

Query  1    IVAPDTVIHCEGEPVKREEEERLDEIGYEDIGGCRKQMAQIREMIELPLRHPTLFKTLGV  60
            +VAPDT I CEGEPVKRE+EERLDE+GY+D+GG RKQMAQIRE++ELPLRHP LFK++GV
Sbjct  179  VVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGV  238

Query  61   KPPRGVLLYGPPGSGKTLIAKAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEK  120
            KPP+G+LLYGPPGSGKTLIA+AVANETGAFFF INGPE+MSK+AGE+E+NLR+AFEEAEK
Sbjct  239  KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEK  298

Query  121  NAPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGLKGRGQVVVIGATNRQNSIDP  180
            NAP+IIFIDEIDSIAPKREKTNGEVERR+VSQLLTLMDGLK R  V+V+GATNR NSIDP
Sbjct  299  NAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP  358

Query  181  ALRRFGRFDREIDIGVPDDNGRLEILRIHTRNMKLGPDVRLEELASSTHGFVGADLAQLC  240
            ALRRFGRFDREIDIGVPD+ GRLE+LRIHT+NMKL  DV LE ++  THG+VGADLA LC
Sbjct  359  ALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALC  418

Query  241  TEAALSCIREKMDLI  255
            TEAAL CIREKMD+I
Sbjct  419  TEAALQCIREKMDVI  433



Lambda     K      H
   0.319    0.139    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 78655735730


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40