bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_1009_orf1
Length=146
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF11_0239                                                       107    7e-23


> 5833.PF11_0239
Length=1617

 Score =  107 bits (268),  Expect = 7e-23, Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 88/147 (59%), Gaps = 3/147 (2%)

Query  1     VDEKALRQIFNAFDSSGRGFLELEDFCRMYWEILSRVREKYYPEKTMKVRRSLFVGRRNL  60
             VD+  L  ++  +DSS    +   DF +MYW++L ++++KYYP K  K++R+  + R+ L
Sbjct  1107  VDKNILSIVYKDYDSSKNNRMNYTDFRQMYWDLLKQIKKKYYPTKNFKIKRNCIISRKKL  1166

Query  61    AQTGL-AITDLFTFVKKLGSGSFGDVHRVIEKSSGLERVIKTINRDRSQVPREQIEAEIE  119
                   +I +  +F K LG G+FG+VH V +    L +V+K +   +  +   +I  EI 
Sbjct  1167  GGYDYSSIYNYLSFKKILGYGAFGEVHLVEDNICKLYKVVKIL--KKKSMKHIKINEEIN  1224

Query  120   VLKSLDHPNIIKIFEVFEDYHNVYIVM  146
             VL  LDHPNIIKIF+V+E+    YIVM
Sbjct  1225  VLIYLDHPNIIKIFDVYENVDCTYIVM  1251



Lambda     K      H
   0.324    0.140    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22393349475


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40