bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_1020_orf2
Length=121
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  3702.AT5G52360.1                                                     100    1e-20


> 3702.AT5G52360.1
Length=137

 Score =  100 bits (250),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 80/126 (63%), Gaps = 12/126 (9%)

Query  5    ASGMPVNDICVTTFNELKLRHAFKWIIFKIDHDEIVVEKKGTSGK--DDFSKELPTSDCR  62
            ASGM V D C   F ELK +  +++IIF+ID  ++VVEK G+  +  DDF+  LP ++CR
Sbjct  5    ASGMAVEDECKLKFLELKAKRNYRFIIFRIDGQQVVVEKLGSPQENYDDFTNYLPPNECR  64

Query  63   YAVYD---------EGQRIHFILWSPDCAPVKPRMIYSSSKDALGKKLEGTMATTLEAHE  113
            YAVYD         +  +I FI WSPD + V+ +M+Y+SSKD   ++L+G +   L+A +
Sbjct  65   YAVYDFDFTTAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDG-IQVELQATD  123

Query  114  LGDLSV  119
              ++S+
Sbjct  124  PSEMSL  129



Lambda     K      H
   0.319    0.136    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22998535989


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40