bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_1098_orf3
Length=355
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF11_0157                                                       259    7e-68


> 5833.PF11_0157
Length=390

 Score =  259 bits (663),  Expect = 7e-68, Method: Compositional matrix adjust.
 Identities = 129/296 (43%), Positives = 196/296 (66%), Gaps = 6/296 (2%)

Query  1    YLPGFELPSNLRAVPSLTDACRDADLLVFVMPHQFIERACRELRKAKLLPPHCRAISLIK  60
            Y+ G ++P N+ A+ +L +   DADLL+FV+PHQ+++    E+ +   L  + RAISLIK
Sbjct  97   YMKGMKIPENILAISNLKEVIDDADLLIFVLPHQYLDNVLDEIVQNNNLKKNARAISLIK  156

Query  61   GIGVRNGWPLTLTHEIGSILDLPKPCI-LSGANVANDVAAENFAEATIGHPDGETETAAL  119
            GI +    P  L+  I   LD+   C+ LSG+N+A +++ E+F+E+TIG      E   +
Sbjct  157  GIKMVRSKPQLLSDIIEKKLDIE--CLALSGSNIAEELSREHFSESTIGFEKKGNE--VI  212

Query  120  WQLLFDRPNFKINVLPDVDGVEVCGALKNVVALAGGFCEGMGQGTNTKAAILRLGVEEIK  179
            WQ LFDR  FK+N + D  GVE+CGALKNV+AL  GF +G+    NTK+AI+R+G+EE+K
Sbjct  213  WQNLFDRTYFKVNCIQDKPGVEICGALKNVIALGVGFIDGLTASYNTKSAIIRIGLEEMK  272

Query  180  TFTMLFFGDLLADTLYDSAGYADVITTVFGGRNARVAAAFVRQKGKD-WDQLEKEMLNGQ  238
             F  +FF ++L +T  DS G AD+ITT  GGRN + A  F ++KG+D W+ +E E+LNGQ
Sbjct  273  KFAKMFFPNVLDETFLDSCGLADLITTCLGGRNFKCAKEFAKRKGRDSWELIEAELLNGQ  332

Query  239  KLQGPATLELVAEVIRANEVEHLFPLFTSTYAVAFQNADPQAILDVFRTNRPRSIQ  294
            KLQG  T + V +V+  ++++  FPL  + Y ++FQ  +P +I+DV  T + R+I+
Sbjct  333  KLQGIDTTKEVYDVLEYHQLKTEFPLICTIYEISFQKKNPCSIIDVLSTKKLRNIK  388



Lambda     K      H
   0.320    0.136    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 134495089842


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40