bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1102_orf1 Length=176 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd4_930 202 3e-51 > 5807.cgd4_930 Length=699 Score = 202 bits (515), Expect = 3e-51, Method: Composition-based stats. Identities = 98/162 (60%), Positives = 122/162 (75%), Gaps = 3/162 (1%) Query 15 FFLLFFLKLQQDNRIKKITPVPDAYTPVLKFTFSGVDIDLLFARLYLRCIPTSWIGLYKD 74 FF F KLQQD + K+ PVPDAYTP++K + G+++DLLFA L L IP D Sbjct 129 FFSFFLAKLQQDINVTKVQPVPDAYTPIIKMVYHGMEMDLLFACLNLSRIPND--LNTLD 186 Query 75 NDILRHTDEKTARSLNGSRVADMLLTLVPNKLVFKTSLRFIKQWAKSRGIYSNVMGYLGG 134 +D+L++ D+KTARSLNG RV DM+L LVPNK F+T+LRF+K W+K+RGIYSNV+GYLGG Sbjct 187 DDLLKNVDDKTARSLNGCRVNDMILQLVPNKESFRTALRFVKHWSKARGIYSNVLGYLGG 246 Query 135 ISWAILVARCCQLYPNFPPSLIIQRFFTVYTQWQWSRSPVVL 176 ISWAIL AR CQLYPN PS II RFF +Y WQW ++PV+L Sbjct 247 ISWAILTARICQLYPNAAPSQIINRFFYIYKTWQW-KNPVIL 287 Lambda K H 0.330 0.144 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 35336795289 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40