bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_1105_orf1
Length=116
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5807.cgd4_650                                                       69.7    2e-11


> 5807.cgd4_650
Length=1965

 Score = 69.7 bits (169),  Expect = 2e-11, Method: Composition-based stats.
 Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 3/85 (3%)

Query  21    LRKRRQQVGDSFAAERCILIYGAENIKAFLAWRDKRLAKKRQ--RQMNAVHSKEALA-GK  77
             +R RR      +  E+ + IYG ENI+ FL WR  R+  KR+  RQ+N       L    
Sbjct  1551  IRVRRNMNTWQYEDEKVVYIYGEENIRYFLYWRRMRMQLKREERRQLNPTGVPGVLGRAS  1610

Query  78    RICRACGRPGHIASNVNCPLYRGPK  102
             R CR CG+ GHIASN  CP Y G K
Sbjct  1611  RTCRRCGQVGHIASNPMCPYYEGNK  1635



Lambda     K      H
   0.324    0.136    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22619469984


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40