bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1184_orf1 Length=130 Score E Sequences producing significant alignments: (Bits) Value 5833.MAL13P1.63 121 6e-27 > 5833.MAL13P1.63 Length=1192 Score = 121 bits (303), Expect = 6e-27, Method: Composition-based stats. Identities = 65/136 (47%), Positives = 90/136 (66%), Gaps = 11/136 (8%) Query 1 LNKLTIEKFGVIAEKLAQILEKSLNCQAEIRIQVDAIIDKAVTEPDWSEMYADLCQLLQW 60 LNKLT+E F +I EK+ QI+E LN EI+ V+ +IDKAV E DWSEMYADLCQ L+W Sbjct 906 LNKLTVENFPIITEKMCQIMESRLNTD-EIQTVVNQVIDKAVLEHDWSEMYADLCQTLKW 964 Query 61 RSVAPEGDPETIRRTPFMLGLLTRIQQEFEAMPAALQHEVE-----GEAEEALQ-EEVRL 114 RS + E ++T F + LL +IQ+++E +P+ + ++ E EE L E + Sbjct 965 RS----PNFEMKKKTSFEIALLKKIQEQYENLPSTFESTMKEKLKSDENEEELSFVEQKQ 1020 Query 115 KRRVLGVVKLIGELFH 130 K+R+LG+VKLIGELF Sbjct 1021 KKRLLGIVKLIGELFQ 1036 Lambda K H 0.319 0.136 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23020010250 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40