bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_1213_orf2
Length=201
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5807.cgd2_1170                                                       125    1e-27


> 5807.cgd2_1170
Length=475

 Score =  125 bits (313),  Expect = 1e-27, Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 85/135 (62%), Gaps = 1/135 (0%)

Query  56   REEALLLPVERPHCGTQTHNKVCQLFIPGFRECLLFAFSCSICGAKNSVIKTAGAYGQTG  115
             E+ +   V  P+CG    + VC++ IPGFR CL+ AF C+ CG K + +K +GAYG+  
Sbjct  264  NEDRIKFDVPCPNCGNNGESDVCEIDIPGFRRCLIMAFVCNFCGIKTNELKPSGAYGELA  323

Query  116  RRWILTVEGEEDLNRDVLKGDTSTIIIPSLDFSMEGGAQAGTLTTIEGLIKSLREGLAES  175
            ++WILTVE E DLNRD+LK DT++I IP ++  M  G+     TT+EG+I  + + L + 
Sbjct  324  KKWILTVESELDLNRDILKSDTASIEIPEIELEMGMGSLGSLFTTVEGMIVKITDSLKDC  383

Query  176  VPFAVGDSAAAASRE  190
              F  GDSA +  ++
Sbjct  384  FTFQ-GDSATSEQKK  397



Lambda     K      H
   0.313    0.130    0.373 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 48387021971


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40