bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1228_orf4 Length=125 Score E Sequences producing significant alignments: (Bits) Value 8364.ENSXETP00000011195 73.9 1e-12 > 8364.ENSXETP00000011195 Length=423 Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 55/123 (44%), Positives = 70/123 (56%), Gaps = 0/123 (0%) Query 1 SVLDGCVLAGSVLDGCVLDGSVLDGCVLDGSVLAGSVLDGCVLDGSVLDGSVLAGSVLDG 60 S+L +L GS+L L GS+L L GS+LA L G +L L GS+LA L G Sbjct 104 SILALVILTGSILALVTLTGSILALVTLTGSILALVTLTGSILALVTLTGSILALVTLTG 163 Query 61 SVLAGSVLDGSVLAGSVLDGSVLAGSVLDGSVLAGSVLDGSVLAGSVLDGCVLDGSVLDG 120 S+LA L GS+LA L GS+LA L GS+LA L GS+LA L G +L +L G Sbjct 164 SILALVTLTGSILALVTLTGSILALVTLTGSILALVTLTGSMLALVTLTGSILALVILTG 223 Query 121 SVL 123 S+L Sbjct 224 SML 226 Lambda K H 0.316 0.141 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 22670743557 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40