bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_1229_orf1
Length=202
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF10_0121 110 4e-23
> 5833.PF10_0121
Length=231
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 99/160 (61%), Gaps = 5/160 (3%)
Query 12 PIHLQEKSSLYTAEEILLSSSFLPFIKGILIPHGLIINRIEKMAYDICNYYKEGELHLLC 71
P+ +++ Y + ++ + + ++ +L+P+G+I NRIEK+AYDI Y E H+LC
Sbjct 16 PVFVKDDDG-YDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILC 74
Query 72 LLKGARTFFGDL---TAAIYNHKSGCTKLDIF-HHFLQIRSYKNGEATEDVSFLGGDLST 127
LLKG+R FF L + I+N+ + T +F H+++++SY N ++T + + DLS
Sbjct 75 LLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSC 134
Query 128 IKGKEVIIIDDVIETGKTITYIYKWLNKFNPRGVRTAALI 167
+KGK V+I++D+I+TGKT+ ++L KF + V A L
Sbjct 135 LKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLF 174
Lambda K H
0.314 0.131 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 48999515920
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40