bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1263_orf1 Length=110 Score E Sequences producing significant alignments: (Bits) Value 349161.Dred_3137 82.4 3e-15 > 349161.Dred_3137 Length=506 Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 47/106 (44%), Positives = 69/106 (65%), Gaps = 2/106 (1%) Query 1 DLEKVVRETSVESVLIAAPGLSQSALSDLIYRVQLLVKDVGVILNLVGVPMSNIEAESFF 60 D E+++ +T V+ V++AAPGL L L R+Q LV +V V+ +L G+ M+ IE E FF Sbjct 227 DAEELIAKTKVQDVIVAAPGLPPKELVTLTNRLQPLVNNVMVVPDLFGLSMNGIEVEYFF 286 Query 61 DAKIMVLHIKNDLARKSNQIVKRLFD-VAATIIGGICILPVLFIVA 105 D + ++L+IKN L N+ +KR FD V TII +CI P+L I+A Sbjct 287 DEQTLLLNIKNKLRSALNRGIKRAFDIVTGTIISVLCI-PILVILA 331 Lambda K H 0.326 0.141 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 23096258976 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40