bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_1310_orf2
Length=151
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  5833.PF13_0096                                                       119    3e-26


> 5833.PF13_0096
Length=640

 Score =  119 bits (297),  Expect = 3e-26, Method: Composition-based stats.
 Identities = 49/77 (63%), Positives = 62/77 (80%), Gaps = 0/77 (0%)

Query  75   KRVRRTCPYLGTINKHMLDFDFEKVCSICLSNQHVYACLVCGRYFQGRGRSTFAFMHALE  134
            K+  R CPYL TIN+++LDFDFEK+CSI LSN HVYACLVCG YFQG G+ T A+ H+LE
Sbjct  82   KKRNRVCPYLRTINRNLLDFDFEKLCSISLSNLHVYACLVCGLYFQGIGKGTHAYTHSLE  141

Query  135  QRHFVYVNLTTCKVYCL  151
            + H+V++NL TCK  C+
Sbjct  142  KNHYVFINLETCKTCCI  158



Lambda     K      H
   0.311    0.119    0.337 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 22675567716


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40