bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_1497_orf3
Length=111
Score E
Sequences producing significant alignments: (Bits) Value
60481.Shewmr7_1875 130 1e-29
> 60481.Shewmr7_1875
Length=527
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 58/110 (52%), Positives = 81/110 (73%), Gaps = 0/110 (0%)
Query 2 CGAANSLEVEVFARIIQGLGGAFLIPLSHAIILDTYPPEQQGKAMALWGMASVLGSFFGP 61
CGAA +LE V R++QG+ GA L+PLS +++LD+YPPE+ G AMALWG+ ++G GP
Sbjct 119 CGAAQNLEQIVLFRLLQGVFGASLVPLSQSVLLDSYPPERHGSAMALWGVGVMVGPILGP 178
Query 62 TVGGYVTEYMTWRYIFYFNVPFGLLALAGAAVFLPETQRDPTRKLDWFGF 111
++GG++TEY WR++FY N+PFGLLA G A ++ ET D +RK D GF
Sbjct 179 SLGGWLTEYYNWRWVFYINLPFGLLAWFGLAAYVKETPLDHSRKFDLLGF 228
Lambda K H
0.327 0.144 0.465
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 23016794144
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40