bitscore colors: <40, 40-50 , 50-80, 80-200, >200

           BLASTP 2.2.24+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: eggV2
           2,483,276 sequences; 915,453,621 total letters



Query=  Emax_1565_orf1
Length=88
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  365044.Pnap_2792                                                    90.5    1e-17


> 365044.Pnap_2792
Length=368

 Score = 90.5 bits (223),  Expect = 1e-17, Method: Composition-based stats.
 Identities = 40/87 (45%), Positives = 59/87 (67%), Gaps = 2/87 (2%)

Query  2    IQPFTDWTLNKNAAYLHYCDNETIHGLEFPSFPDFSSFSLPSPRYLVADFASNLGTKQIP  61
            + P   W L ++A+Y+H C NETIHG+EF   PD  +    +P  LV DF+S++ ++ + 
Sbjct  129  LPPPATWQLRRDASYVHVCTNETIHGVEFQELPDLKALGSDAP--LVIDFSSHVASRPVD  186

Query  62   WNIIDLAYAGAQKNIGIAGVTLVVVHK  88
            W+ + LA+ GAQKN+G AGVTLVVV +
Sbjct  187  WSKVGLAFGGAQKNLGPAGVTLVVVRE  213



Lambda     K      H
   0.321    0.138    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 23142708390


  Database: eggV2
    Posted date:  Dec 15, 2009  4:47 PM
  Number of letters in database: 915,453,621
  Number of sequences in database:  2,483,276



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40