bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_1648_orf1
Length=118
Score E
Sequences producing significant alignments: (Bits) Value
5833.PF13_0091 67.8 1e-10
> 5833.PF13_0091
Length=906
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 8/122 (6%)
Query 1 LLEWKELSFKTTYIDVADRFHLEEWWTWMQESERDDFFQEWMFDNKQMFKDKIKQRRRED 60
LL W +L+ TTY++ A +F+ +EWW W+ E ERD+ FQ++M K FK+ +++R++
Sbjct 517 LLNWDKLNECTTYVEFASQFYKQEWWEWITEKERDEVFQDFMDGYKSKFKETRRKKRKQK 576
Query 61 VAMLEEILEQNPQEYPFQK----KWVDVKDQLLSHPKLQNMMKIDVLQVWEEWVRHGYDQ 116
+ EIL+Q QEY KW DV+ ++ KID L WE++ ++
Sbjct 577 M----EILKQKFQEYATDNKNPLKWNDVQKYFRDDEDFHSLHKIDALAAWEDFYEKYHNV 632
Query 117 ER 118
E+
Sbjct 633 EK 634
Lambda K H
0.321 0.135 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22460540320
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40