bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1667_orf1 Length=173 Score E Sequences producing significant alignments: (Bits) Value 5833.PFI0460w 139 4e-32 > 5833.PFI0460w Length=489 Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 82/159 (51%), Positives = 99/159 (62%), Gaps = 0/159 (0%) Query 11 CGQHKCIPSRPSVPFEGNSVYRQEYGPKPLPTPLQQAPVTLPPSLPFEGESSYRTEYGPK 70 CG H+C S+PFEG S YR E+GPK LP Q + P LPFEG+++YR+E+GPK Sbjct 77 CGFHRCPRIIKSIPFEGESNYRSEFGPKALPELPPQIYMKPPKPLPFEGQTNYRSEFGPK 136 Query 71 PLPPPPKASTVTVPASLPFEATTAYRTDYGPKPLPPPTKPAEIHLQPSLPFEASSSYRSD 130 PLP P + P SLPFE T YR+++GPKPLP E L LPFE S+YRS+ Sbjct 137 PLPELPPQIYMKPPKSLPFEGETNYRSEFGPKPLPELPPRIETKLVKPLPFEGESNYRSE 196 Query 131 YCAKPLPERMPVTAAPTPVSLPFRGTSAYREEFGPKPLP 169 + KPLPE P P SLPF G + YR EFGPKPLP Sbjct 197 FGPKPLPELPPQIYMKPPKSLPFEGETNYRSEFGPKPLP 235 Lambda K H 0.312 0.135 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 33476963958 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40