bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1790_orf1 Length=169 Score E Sequences producing significant alignments: (Bits) Value 5833.PF14_0311 118 9e-26 > 5833.PF14_0311 Length=269 Score = 118 bits (295), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 61/169 (36%), Positives = 104/169 (61%), Gaps = 1/169 (0%) Query 2 MLDRLQLRIVKYIESLTVSMDMLITRCEGLEKGLAQMKGDLPSKLEQDFAALQREAAALR 61 M++ + +I IES++ +D +I +CE LEK ++Q+K D+P+K++ D +L+RE A + Sbjct 94 MINNVLNKITTKIESISSDLDKIIHKCEELEKVISQIKVDIPTKIQTDMISLKREIADFQ 153 Query 62 QAFAAETKNKNERESLACKKLGEFQLLVDSKFEAEIAVRQEQLNLIKREVERLVKGD-DA 120 NK +R+++ K+ + K ++EIA +Q L+ +K E +RL+ D D Sbjct 154 LVINKYLNNKKKRDNILYGKIENISAYLTGKIQSEIAFKQHDLSYLKNESDRLLNYDNDD 213 Query 121 HEQFHAFIMEELMALKNGLALATQAREQSDDEIIQAINQYTTALQKGLR 169 F ++E+ +K+ L L +AREQSDD+IIQA+N+YT+ LQK L+ Sbjct 214 DVNFKNVFLQEVEEIKDALNLTVKAREQSDDDIIQAMNKYTSVLQKALQ 262 Lambda K H 0.317 0.131 0.344 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 30997188850 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40