bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1801_orf2 Length=163 Score E Sequences producing significant alignments: (Bits) Value 3702.AT1G68020.2 146 2e-34 > 3702.AT1G68020.2 Length=860 Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 78/161 (48%), Positives = 96/161 (59%), Gaps = 2/161 (1%) Query 2 RSLLEDWFRDVKGIGLCAEHGYYYRLDKLTGDEWGCMCPDADFTWKSVAVELMLQYVKRT 61 R L DWF + +G+ AEHGY+ RL K EW D +WK +A +M Y + T Sbjct 650 RETLSDWFSPCEKLGIAAEHGYFLRLRKAV--EWENCVAAVDCSWKQIAEPVMELYTETT 707 Query 62 QGSFTENKGSALVFQYRDADPDFGQLQAKDLSSHLSELLFGYPVTVVSGKGYVEVKLLGV 121 GS E+K +ALV+ Y DADPDFG QAK+L HL +L PVTV G+ YVEVK GV Sbjct 708 DGSTIEDKETALVWSYEDADPDFGSCQAKELLDHLESVLANEPVTVKRGQNYVEVKPQGV 767 Query 122 NKGKAVERILQTLSTLHGDIDFVFCIGDDRSDEDMFAVINS 162 +KG R+L + +FV CIGDDRSDEDMF VI S Sbjct 768 SKGLIARRMLSMMQERGTLPEFVLCIGDDRSDEDMFEVICS 808 Lambda K H 0.321 0.140 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 28009217385 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40