bitscore colors: <40, 40-50 , 50-80, 80-200, >200

BLASTP 2.2.24+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eggV2
2,483,276 sequences; 915,453,621 total letters
Query= Emax_1806_orf1
Length=123
Score E
Sequences producing significant alignments: (Bits) Value
7165.AGAP003497-PA 164 5e-40
> 7165.AGAP003497-PA
Length=457
Score = 164 bits (416), Expect = 5e-40, Method: Composition-based stats.
Identities = 72/123 (58%), Positives = 98/123 (79%), Gaps = 6/123 (4%)
Query 1 TTDKELREYFEKFGELVMAQVRKDPKTGFSKGFGFIRFADYENQLKVVSTRHCIDSRYCD 60
TT++ LREYFE FGEL++ Q++KD KTG SKG+GFIRFA +E+Q+K +S RH IDSR+CD
Sbjct 126 TTEESLREYFETFGELLVVQIKKDSKTGQSKGYGFIRFARFESQMKALSKRHLIDSRWCD 185
Query 61 VRLPVSRDGFGNEIRNREEFNKKIFIGRLTSDITNEDLKEYFGKYGEVSDVFVPKPFRGF 120
V++P S+D + + + KIF+GRLT DI ++D+++YF KYGEV+DVF+PKPFR F
Sbjct 186 VKVPSSKD------QTQHQMPSKIFLGRLTEDINSDDIRDYFSKYGEVTDVFIPKPFRAF 239
Query 121 AFV 123
AFV
Sbjct 240 AFV 242
Lambda K H
0.324 0.143 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 22834639773
Database: eggV2
Posted date: Dec 15, 2009 4:47 PM
Number of letters in database: 915,453,621
Number of sequences in database: 2,483,276
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40