bitscore colors: <40, 40-50 , 50-80, 80-200, >200
BLASTP 2.2.24+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schaffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: eggV2 2,483,276 sequences; 915,453,621 total letters Query= Emax_1813_orf1 Length=185 Score E Sequences producing significant alignments: (Bits) Value 5807.cgd6_4890 134 2e-30 > 5807.cgd6_4890 Length=446 Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 68/180 (37%), Positives = 112/180 (62%), Gaps = 3/180 (1%) Query 9 IILYTAGLLISSTGNTISFKRMLDKMPNYSGFLNQLTNFVFIPIFAALCLYQYFVGKLSQ 68 +I+ LLISS N++ FK+M MPN+ FL QLT+ ++IP+F + L YF G+LS+ Sbjct 46 LIVCMMSLLISSVFNSVFFKKMTSAMPNHVWFLTQLTSALYIPLFGLVLLISYFRGELSR 105 Query 69 EVLSFPKKNFALMGSLDGVCGIMAVVGGVHTSGTAQVVLSQLGIPVMLLLCRFMLGKRYN 128 + L FP F +MG D I+ ++ HTSG QVVL Q+ P+ L++ + R++ Sbjct 106 DNLEFPMSKFWMMGFFDAFSSILTLLASTHTSGVMQVVLGQMCTPITLVMLSSICKDRFH 165 Query 129 IIQHIGAAVIIFGVLVVESP---GLLHPTKEDNSNSPFFNLLFLLSILPSSLSYVVKEVA 185 +Q+IGA V++ G+ +V+S G+ + +NSN FN+LF+++ +P+S S V K+++ Sbjct 166 KLQYIGATVMVMGIFIVKSTLILGIRKSSGAENSNQLIFNILFVIACIPASASSVYKDLS 225 Lambda K H 0.326 0.142 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 40134932565 Database: eggV2 Posted date: Dec 15, 2009 4:47 PM Number of letters in database: 915,453,621 Number of sequences in database: 2,483,276 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40